1) Do you know for sure that the pads you took out were the same thickness when you bought the car or when you installed them? If not you may not have a problem.
2) If the inside pistons have trapped air they simply are not being used. "Proper bleeding" may be the solution . . . whatever that means.
3) The out side pads may be hanging up due to either pad/caliper interference or dead seals on the outside pistons preventing them from retracting slightly.
You can troubleshoot 2 and 3 with some easy street driving and using fingers to check temperatures on the calipers (don't touch the rotors unless your fingers are really tough). Drive a short distance and feel the outside piston area versus the inside piston area. Can you feel a difference? Repeat with some braking first. Significant brake drag or lack of braking on one side of the rotors may be obvious by the temperature differential. This assumes, of course, that the wheels and brake design give you any access.
